The detailed information of tRNA gene sequence


Sequence ID>ENV08001941
Genome IDABOK01057979
Search identical group
Phylum/Classmosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 113
End posion on genome 38
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
nnnnnnaaat
tRNA gene sequence 
GCGGGAATAGCTCAGTTGGTAGAGCGATACCTTGCCAAGGTATAGGTCGCGAGTTCGAGT
CTCGTTTCCCGCTCCA
Downstream region at tRNA end position 
aattcctaag
Secondary structure (Cloverleaf model)
>ENV08001941	Gly	GCC
                   t      TCCA aattcctaag
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T          T G
                    T     T G C T C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A - T
                    T - A
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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