The detailed information of tRNA gene sequence


Sequence ID>WENV170013018
Genome IDASRR01000094
Search identical group
Phylum/Class[ASRR] bioreactor metagenome; day 185 samples from continuous culture bioreactor inoculated with sediment from the German Wadden
Species
Start position on genome 9530
End posion on genome 9441
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tcgaatatgc
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGTCGAACGGGGCGGTCTCGAAAACCGTTGTGCCTTTGCGGGTA
CCGGGGGTTCGAATCCCTTCCTCTCCGCCA
Downstream region at tRNA end position 
ttttcatttg
Secondary structure (Cloverleaf model)
>WENV170013018	Ser	CGA
                   c      GCCA ttttcatttg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + + | | |     G
    G       G G C C       G G G G G     C
    G         | | |                 T T
    T       A C G G
      C G A        G     TGTGCCTTTGCGGGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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