The detailed information of tRNA gene sequence


Sequence ID>WENV170013023
Genome IDASRR01000188
Search identical group
Phylum/Class[ASRR] bioreactor metagenome; day 185 samples from continuous culture bioreactor inoculated with sediment from the German Wadden
Species
Start position on genome 5601
End posion on genome 5526
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aactacaaat
tRNA gene sequence 
AGGTCAGTAGCTCCAATGGTAGAGCGCCGGATTCCAAATCCGATGGTTGTGGGTTCGAGT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
cttattcttt
Secondary structure (Cloverleaf model)
>WENV170013023	Trp	CCA
                   t      GCCA cttattcttt
                     A - T
                     G - C
                     G - C
                     T + G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      A A C        A      |   | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     TGGTT
                    C   A
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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