The detailed information of tRNA gene sequence


Sequence ID>WENV170013034
Genome IDASRR01000393
Search identical group
Phylum/Class[ASRR] bioreactor metagenome; day 185 samples from continuous culture bioreactor inoculated with sediment from the German Wadden
Species
Start position on genome 359
End posion on genome 451
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
accggtctgc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGCTCCCCTGCTAAGGGAGTAGGCGGTGTCGAACC
GTCTCGAGGGTTCGAATCCCTTCCTCTCCGCCA
Downstream region at tRNA end position 
ctttaccttt
Secondary structure (Cloverleaf model)
>WENV170013034	Ser	GCT
                   c      GCCA ctttaccttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TAGGCGGTGTCGAACCGTCTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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