The detailed information of tRNA gene sequence


Sequence ID>WENV170013052
Genome IDASRR01001030
Search identical group
Phylum/Class[ASRR] bioreactor metagenome; day 185 samples from continuous culture bioreactor inoculated with sediment from the German Wadden
Species
Start position on genome 1466
End posion on genome 1541
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tttgcgaagt
tRNA gene sequence 
AGGGGTGTAGCTCAGCTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGGGGGTTCGAGT
CCCTCCGCCCCTGCCA
Downstream region at tRNA end position 
tttcgcactt
Secondary structure (Cloverleaf model)
>WENV170013052	Trp	CCA
                   t      GCCA tttcgcactt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T G
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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