The detailed information of tRNA gene sequence


Sequence ID>WENV170013288
Genome IDATLU01003036
Search identical group
Phylum/Class[ATLU] bioreactor metagenome; continuous culture bioreactor inoculated with sediment procaryotes from the German
Species
Start position on genome 478
End posion on genome 567
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gctctgttgc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTAGGCGGGAGACCGTC
TCCAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
ttatcttctt
Secondary structure (Cloverleaf model)
>WENV170013288	Ser	GGA
                   c      GCCA ttatcttctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       C A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCGGGAGACCGTCTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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