The detailed information of tRNA gene sequence


Sequence ID>WENV170013387
Genome IDAUZX01000981
Search identical group
Phylum/Class[AUZX] mine drainage metagenome; uppermost (B1A) sediment-attached strata from acid streamer/mats thriving at Los Rueldos
Species
Start position on genome 505
End posion on genome 413
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ggggtcaact
tRNA gene sequence 
GGAGAGATGTCCGAGCGGCCGAAGGAGCACGACTGGAAATCGTGTAGGTGCCTAATAAGC
GCCTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tttttccccc
Secondary structure (Cloverleaf model)
>WENV170013387	Ser	GGA
                   t      GCCA tttttccccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      C G A        G     TAGGTGCCTAATAAGCGCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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