The detailed information of tRNA gene sequence


Sequence ID>WENV170013392
Genome IDAUZX01001522
Search identical group
Phylum/Class[AUZX] mine drainage metagenome; uppermost (B1A) sediment-attached strata from acid streamer/mats thriving at Los Rueldos
Species
Start position on genome 408
End posion on genome 483
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tctatatgat
tRNA gene sequence 
GGGGCTGTAGCTCAGTGGTTAGAGCAGTCGGCTCATAACCGATTGGTCGTTGGTTCAAGT
CCAACCAGCCCCACCA
Downstream region at tRNA end position 
ttaatactca
Secondary structure (Cloverleaf model)
>WENV170013392	Met	CAT
                   t      ACCA ttaatactca
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     C A A C C     A
      T G A        A      | | | | |     A
    G       C T C G       G T T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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