The detailed information of tRNA gene sequence


Sequence ID>WENV170013396
Genome IDAUZX01002058
Search identical group
Phylum/Class[AUZX] mine drainage metagenome; uppermost (B1A) sediment-attached strata from acid streamer/mats thriving at Los Rueldos
Species
Start position on genome 306
End posion on genome 382
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttgcattttt
tRNA gene sequence 
CGGGGCGTGGCGCAGCCCGGTAGCGCACCTGCTTTGGGAGCAGGGAGTCGGAGGTTCAAA
TCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
tcactccaat
Secondary structure (Cloverleaf model)
>WENV170013396	Pro	TGG
                   t      ACCA tcactccaat
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        G      + | | | |     A
    C       C G C G       G G A G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        A     GAGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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