The detailed information of tRNA gene sequence


Sequence ID>WENV170013402
Genome IDAUZX01002850
Search identical group
Phylum/Class[AUZX] mine drainage metagenome; uppermost (B1A) sediment-attached strata from acid streamer/mats thriving at Los Rueldos
Species
Start position on genome 560
End posion on genome 643
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cctcagttga
tRNA gene sequence 
GCTGGGGTAGCCTAGCCTGGTAAGGCGCAGGTCTGGAAAGCCTGTGCTCTCGTAGCTCGG
GAGTTCGAATCTCCCCCCCAGCGCtc
Downstream region at tRNA end position 
ataagtcaac
Secondary structure (Cloverleaf model)
>WENV170013402	Ser	GGA
                   a      GCtc ataagtcaac
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C C T C     A
      C G A        A      | | | | |     G
    C       T C C G       G G G A G     C
    T       | | | |                 T T
    G       A G G C
      G T A        G     TGCTCTCGTAGCTC
                    C - G
                    A - T
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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