The detailed information of tRNA gene sequence


Sequence ID>WENV170013412
Genome IDAUZX01003334
Search identical group
Phylum/Class[AUZX] mine drainage metagenome; uppermost (B1A) sediment-attached strata from acid streamer/mats thriving at Los Rueldos
Species
Start position on genome 1265
End posion on genome 1181
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgccgcctgc
tRNA gene sequence 
GCTGAGGTAGCCTAGCCCGGAAAGGCGCCAGCCTTGAAAGCTGGTGGCGGTCTCGCCTCG
GGAGTTCAAATCTCCCCCTCAGCGCtc
Downstream region at tRNA end position 
ccatagcttt
Secondary structure (Cloverleaf model)
>WENV170013412	Ser	TGA
                   c      GCtc ccatagcttt
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      C G A        A      | | | | |     A
    C       T C C G       G G G A G     C
    C       | | | |                 T T
    G       A G G C
      G A A        G     TGGCGGTCTCGCCTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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