The detailed information of tRNA gene sequence


Sequence ID>WENV170013432
Genome IDAUZX01004941
Search identical group
Phylum/Class[AUZX] mine drainage metagenome; uppermost (B1A) sediment-attached strata from acid streamer/mats thriving at Los Rueldos
Species
Start position on genome 79
End posion on genome 3
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ggccttccgt
tRNA gene sequence 
CGGGGTGTAGCTCAGCCTGGTAGAGCGCTACTTTCGGGAGGTAGAAGTCGCAGGTTCGAA
TCCTGTCACCCCGACCA
Downstream region at tRNA end position 
aannnnnnnn
Secondary structure (Cloverleaf model)
>WENV170013432	Pro	CGG
                   t      ACCA aannnnnnnn
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G T C C     A
      C G A        A      + | | | |     G
    C       C T C G       G C A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AAGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    T + G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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