The detailed information of tRNA gene sequence


Sequence ID>WENV170013473
Genome IDAUZX01010238
Search identical group
Phylum/Class[AUZX] mine drainage metagenome; uppermost (B1A) sediment-attached strata from acid streamer/mats thriving at Los Rueldos
Species
Start position on genome 189
End posion on genome 114
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
cccactccgt
tRNA gene sequence 
GGGGCCATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAGGTCGACGGTTCGATC
CCGTCTGGCTCCACCA
Downstream region at tRNA end position 
tcccttaccg
Secondary structure (Cloverleaf model)
>WENV170013473	Ala	GGC
                   t      ACCA tcccttaccg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          C T
                    T     C T G C C     A
      C G A        A      | | | | |     G
    T       C T C G       G A C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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