The detailed information of tRNA gene sequence


Sequence ID>WENV170013496
Genome IDAUZX01012185
Search identical group
Phylum/Class[AUZX] mine drainage metagenome; uppermost (B1A) sediment-attached strata from acid streamer/mats thriving at Los Rueldos
Species
Start position on genome 4002
End posion on genome 4094
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcgtcagacc
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTCGAAGGCACTCCCCTGCTAAGGGAGCATGCGGTCAAAAACT
GCATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
actcattgaa
Secondary structure (Cloverleaf model)
>WENV170013496	Ser	GCT
                   c      GCCA actcattgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        A     CATGCGGTCAAAAACTGCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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