The detailed information of tRNA gene sequence


Sequence ID>WENV170013553
Genome IDAUZY01001126
Search identical group
Phylum/Class[AUZY] mine drainage metagenome; lowermost (B1B) sediment-attached strata from acid streamer/mats thriving at Los Rueldos
Species
Start position on genome 104
End posion on genome 13
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgagcgcgta
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTCGAAAGCGCTCCCCTGCTAAGGGAGTAAGGGTGATTAAGCC
CTTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tttcaacatc
Secondary structure (Cloverleaf model)
>WENV170013553	Ser	GCT
                   a      GCCA tttcaacatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TAAGGGTGATTAAGCCCTTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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