The detailed information of tRNA gene sequence


Sequence ID>WENV170013560
Genome IDAUZY01001232
Search identical group
Phylum/Class[AUZY] mine drainage metagenome; lowermost (B1B) sediment-attached strata from acid streamer/mats thriving at Los Rueldos
Species
Start position on genome 173
End posion on genome 100
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cagcggcgta
tRNA gene sequence 
GGGGCCGTAGCTCAGCCTGGTAGAGCGCCTGGCTCATAACCAGGTGGCCGTCGGTTCAAA
CCCGACCGGCCCCAttt
Downstream region at tRNA end position 
atcctgcttc
Secondary structure (Cloverleaf model)
>WENV170013560	Met	CAT
                   a      Attt atcctgcttc
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          C A
                    T     C A G C C     A
      C G A        A      | | | | |     A
    C       C T C G       G T C G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     TGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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