The detailed information of tRNA gene sequence


Sequence ID>WENV170013580
Genome IDAUZY01002658
Search identical group
Phylum/Class[AUZY] mine drainage metagenome; lowermost (B1B) sediment-attached strata from acid streamer/mats thriving at Los Rueldos
Species
Start position on genome 29476
End posion on genome 29400
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccaagtcagc
tRNA gene sequence 
GGAGTGGTAGTTCAGCTGGTTAGAATACCGGCTTGTCACGCCGGGGGTCGCGGGTTCGAG
TCCCGTCCACTCCGCCA
Downstream region at tRNA end position 
ttgagtcaac
Secondary structure (Cloverleaf model)
>WENV170013580	Asp	GTC
                   c      GCCA ttgagtcaac
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      C G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  T       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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