The detailed information of tRNA gene sequence


Sequence ID>WENV170013589
Genome IDAUZY01003248
Search identical group
Phylum/Class[AUZY] mine drainage metagenome; lowermost (B1B) sediment-attached strata from acid streamer/mats thriving at Los Rueldos
Species
Start position on genome 165
End posion on genome 72
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ggcagtcttc
tRNA gene sequence 
GGAGGGGTGTCCGAGCGGTTGAAGGAGCCGCACTCGAAATGCGGTAGGCGGGCACAAACC
TGTCTCGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
gttttccgga
Secondary structure (Cloverleaf model)
>WENV170013589	Ser	CGA
                   c      GCCA gttttccgga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TAGGCGGGCACAAACCTGTCTC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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