The detailed information of tRNA gene sequence


Sequence ID>WENV170013607
Genome IDAUZY01005080
Search identical group
Phylum/Class[AUZY] mine drainage metagenome; lowermost (B1B) sediment-attached strata from acid streamer/mats thriving at Los Rueldos
Species
Start position on genome 580
End posion on genome 488
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcgcaaaccc
tRNA gene sequence 
GGAGAGGTGTCCGAGCGGTTGAAGGAGCACGCCTGGAAAGTGTGTATACGGTCAAAAGCC
GTATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ccagatgact
Secondary structure (Cloverleaf model)
>WENV170013607	Ser	GGA
                   c      GCCA ccagatgact
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TATACGGTCAAAAGCCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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