The detailed information of tRNA gene sequence


Sequence ID>WENV170013617
Genome IDAUZY01005632
Search identical group
Phylum/Class[AUZY] mine drainage metagenome; lowermost (B1B) sediment-attached strata from acid streamer/mats thriving at Los Rueldos
Species
Start position on genome 239
End posion on genome 164
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aacggcgtcT
tRNA gene sequence 
GGGGCTGTAGCTTAGCTAGGTAGAGCGCCTGGCTCATAACCAGGTGGTCATTGGTTCAAA
TCCGATCAGCCCCATta
Downstream region at tRNA end position 
tcaatttcat
Secondary structure (Cloverleaf model)
>WENV170013617	Met	CAT
                   T      ATta tcaatttcat
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T A G C C     A
      C G A        A      | | + | |     A
    T       T T C G       A T T G G     C
    A       + | | |                 T T
    G       G A G C
      G T A        G     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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