The detailed information of tRNA gene sequence


Sequence ID>WENV170013619
Genome IDAUZY01005897
Search identical group
Phylum/Class[AUZY] mine drainage metagenome; lowermost (B1B) sediment-attached strata from acid streamer/mats thriving at Los Rueldos
Species
Start position on genome 1010
End posion on genome 939
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ccgcgtccgc
tRNA gene sequence 
GGGCACGTAGATCAGCGGAAGATCGCTGCTTTCGCAAAGCAGAGGTCGGGGGTTCAAATC
CCCCCGTGTCCAttc
Downstream region at tRNA end position 
gtacggtcgt
Secondary structure (Cloverleaf model)
>WENV170013619	Ala	CGC
                   c      Attc gtacggtcgt
                     G - C
                     G - C
                     G + T
                     C - G
                     A - T
                     C - G
                     G - C          T A
                    T     C C C C C     A
        G A        A      | | | | |     A
      C     C T A G       G G G G G     C
      G     | | | |                 T T
      G     G A T C
        A A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    T - A
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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