The detailed information of tRNA gene sequence


Sequence ID>WENV170013709
Genome IDAUZY01012686
Search identical group
Phylum/Class[AUZY] mine drainage metagenome; lowermost (B1B) sediment-attached strata from acid streamer/mats thriving at Los Rueldos
Species
Start position on genome 6431
End posion on genome 6506
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tccggccgct
tRNA gene sequence 
GCTCCCTTCGTCTAGAGGCCCAGGACGTCGCCCTCTCACGGCGAAAACAGGGGTTCGAAT
CCCCTAGGGAGCGCCA
Downstream region at tRNA end position 
tgaaatcaat
Secondary structure (Cloverleaf model)
>WENV170013709	Glu	CTC
                   t      GCCA tgaaatcaat
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C C A        G     AAAC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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