The detailed information of tRNA gene sequence


Sequence ID>WENV170013737
Genome IDAUZZ01001293
Search identical group
Phylum/Class[AUZZ] mine drainage metagenome; submerged non-stratified mat biofilm (B2A) from acid streamer/mats thriving at Los Rueldos
Species
Start position on genome 1267
End posion on genome 1191
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ggccttccgt
tRNA gene sequence 
CGGGGTGTAGCTCAGCCTGGTAGAGCGCTACTTTCGGGAGGTAGAAGTCGCAGGTTCGAA
TCCTGTCACCCCGACCA
Downstream region at tRNA end position 
aagaatcaag
Secondary structure (Cloverleaf model)
>WENV170013737	Pro	CGG
                   t      ACCA aagaatcaag
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G T C C     A
      C G A        A      + | | | |     G
    C       C T C G       G C A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AAGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    T + G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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