The detailed information of tRNA gene sequence


Sequence ID>WENV170013761
Genome IDAUZZ01004145
Search identical group
Phylum/Class[AUZZ] mine drainage metagenome; submerged non-stratified mat biofilm (B2A) from acid streamer/mats thriving at Los Rueldos
Species
Start position on genome 402
End posion on genome 330
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGGCCTGTAGCTCAGTCGGTAGAGCAGGCGGCTCTTAACCGCAAGGTCCAGGGTTCGAAC
CCCTGCAGGCCCGtaa
Downstream region at tRNA end position 
ccatttcctt
Secondary structure (Cloverleaf model)
>WENV170013761	Lys	CTT
                   n      Gtaa ccatttcctt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          C A
                    T     G T C C C     A
      T G A        A      | | | | |     G
    C       C T C G       C A G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G   A
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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