The detailed information of tRNA gene sequence


Sequence ID>WENV170013766
Genome IDAUZZ01004420
Search identical group
Phylum/Class[AUZZ] mine drainage metagenome; submerged non-stratified mat biofilm (B2A) from acid streamer/mats thriving at Los Rueldos
Species
Start position on genome 391
End posion on genome 302
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cctcagatgc
tRNA gene sequence 
GGAGAGGTGGCAGAGCGGTTGATTGCACCGGTCTTGAAAACCGGCGTCCCTTCACGGGGA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gtcgcaacgc
Secondary structure (Cloverleaf model)
>WENV170013766	Ser	TGA
                   c      GCCA gtcgcaacgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G       + | | |                 T T
    T       T T G C
      T G A        A     CGTCCCTTCACGGGGACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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