The detailed information of tRNA gene sequence


Sequence ID>WENV170013842
Genome IDAUZZ01011165
Search identical group
Phylum/Class[AUZZ] mine drainage metagenome; submerged non-stratified mat biofilm (B2A) from acid streamer/mats thriving at Los Rueldos
Species
Start position on genome 705
End posion on genome 781
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
aaactttttc
tRNA gene sequence 
GGGGGTGTAGCGCAGCCTGGTAGCGCACCTGCATGGGGTGCAGGTGGTCGGAGGTTCAAA
TCCTCTCACCCCGACCA
Downstream region at tRNA end position 
taatctttcg
Secondary structure (Cloverleaf model)
>WENV170013842	Pro	GGG
                   c      ACCA taatctttcg
                     G   G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     A
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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