The detailed information of tRNA gene sequence


Sequence ID>WENV170013888
Genome IDAVBS01009901
Search identical group
Phylum/Class[AVBS] soil metagenome; soil and ice from psychrophilic sampling site; human interference was very low; sample
Species
Start position on genome 102
End posion on genome 193
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcccaggttc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCAGCCGCCTGCTAAGCGGTTGACCGGGTTAAACCG
GTCCGGAGGTTCGAATCCTCTCCTCTCCGCCA
Downstream region at tRNA end position 
cgatcgccgg
Secondary structure (Cloverleaf model)
>WENV170013888	Ser	GCT
                   c      GCCA cgatcgccgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T C T C C     A
      T G A        G      + | | | |     G
    G       G C C G       G G A G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     TGACCGGGTTAAACCGGTCC
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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