The detailed information of tRNA gene sequence


Sequence ID>WENV170013913
Genome IDAVFP01000001
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 31878
End posion on genome 31975
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
aatccagatc
tRNA gene sequence 
GGAAGTGGATAGGGCACTGGTGGCTCTCCCGGACTTCAAATCCGGTGTAGCGGGTTAACA
GCCTGCTGGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
tatcacgcag
Secondary structure (Cloverleaf model)
>WENV170013913	SeC(p)	TCA
                   c      GCCA tatcacgcag
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    A     T A C C C     A
      C A C        T      + | | | |     G
    T       G G G A       G T G G G     C
    G       | + | |                 T T
    G       C T C T
      T G G        C     TGTAGCGGGTTAACAGCCTGCTGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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