The detailed information of tRNA gene sequence


Sequence ID>WENV170013918
Genome IDAVFP01000016
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 6586
End posion on genome 6662
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gagttgatgt
tRNA gene sequence 
CGGGACGTGGCTCAGTCTGGTAGAGCACAGCGTTCGGGACGCTGGGGTCGGAGGTTCAAA
TCCTCTCGTCCCGACCA
Downstream region at tRNA end position 
tttccatttt
Secondary structure (Cloverleaf model)
>WENV170013918	Pro	CGG
                   t      ACCA tttccatttt
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C T C C     A
      T G A        G      + | | | |     A
    C       C T C G       G G A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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