The detailed information of tRNA gene sequence


Sequence ID>WENV170013926
Genome IDAVFP01000077
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 15728
End posion on genome 15802
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
caatgcttcc
tRNA gene sequence 
GCTCCCTTCGTCTAGCGGTTAGGACGCTGGCCTCTCACGCCGGTAACAGGGGTTCGAATC
CCCTAGGGAGCGCCA
Downstream region at tRNA end position 
attcaatcca
Secondary structure (Cloverleaf model)
>WENV170013926	Glu	CTC
                   c      GCCA attcaatcca
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T C C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     TAAC
                    C - G
                    T + G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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