The detailed information of tRNA gene sequence


Sequence ID>WENV170013927
Genome IDAVFP01000083
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 369
End posion on genome 445
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aggcttgtgc
tRNA gene sequence 
AGGCCAGTAGCTCGAATTGGTAGAGCATCGGACTCCAAATCCGAGGGCTGGGGGTTCGAA
TCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
cgattgtgcc
Secondary structure (Cloverleaf model)
>WENV170013927	Trp	CCA
                   c      GCCA cgattgtgcc
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A A G        A      | + | | |     G
    T       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGCT
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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