The detailed information of tRNA gene sequence


Sequence ID>WENV170013928
Genome IDAVFP01000087
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 6314
End posion on genome 6238
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
catagcaaat
tRNA gene sequence 
CGGGGTATAGCGCAGTCTGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCGGGGGTTCGAA
TCCCTCTACCCCGACCA
Downstream region at tRNA end position 
ccttcatcct
Secondary structure (Cloverleaf model)
>WENV170013928	Pro	TGG
                   t      ACCA ccttcatcct
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     C T C C C     A
      T G A        A      | + | | |     G
    C       C G C G       G G G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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