The detailed information of tRNA gene sequence


Sequence ID>WENV170013933
Genome IDAVFP01000093
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 14475
End posion on genome 14565
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctgagctttg
tRNA gene sequence 
GGAGAGGTGGCAGAGCGGTTGAATGCACCGGTCTTGAAAACCGGCGTGGGTTAGTAGCCC
ACCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
accatccacg
Secondary structure (Cloverleaf model)
>WENV170013933	Ser	TGA
                   g      GCCA accatccacg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        A     CGTGGGTTAGTAGCCCACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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