The detailed information of tRNA gene sequence


Sequence ID>WENV170013934
Genome IDAVFP01000105
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 4607
End posion on genome 4521
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
tccgatcatt
tRNA gene sequence 
GCCGGGGTGGCGGAATTGGTAGACGCAGTGGACTCAAAATCCACCGGTGGTAACACCTTA
CGAGTTCGAGTCTCGTCCCCGGTACCA
Downstream region at tRNA end position 
tttcttgccc
Secondary structure (Cloverleaf model)
>WENV170013934	Leu	CAA
                   t      ACCA tttcttgccc
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     T G C T C     A
      T A A        G      | | | | |     G
    T       G G C G       A C G A G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGGTGGTAACACCTT
                    G - C
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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