The detailed information of tRNA gene sequence


Sequence ID>WENV170013936
Genome IDAVFP01000116
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 11610
End posion on genome 11535
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gatgttcaac
tRNA gene sequence 
GGCGGCGTAGCCAAGTGGCTAAGGCAGTGGTCTGCAAAACCATTATTCAGCGGTTCAAAT
CCGCTCGCCGCCTCCA
Downstream region at tRNA end position 
gtgattcaag
Secondary structure (Cloverleaf model)
>WENV170013936	Cys	GCA
                   c      TCCA gtgattcaag
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C G C C     A
      T G A        A      | | | | |     A
    G       A C C G       A G C G G     C
    G         | | |                 T T
    C       A G G C
      T A          A     TATTC
                    G + T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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