The detailed information of tRNA gene sequence


Sequence ID>WENV170013937
Genome IDAVFP01000119
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 2474
End posion on genome 2388
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
gcgatcacct
tRNA gene sequence 
GCCGAGGTGGCGGAATTGGTAGACGCGCATGGTTCAGGTCCATGTGGGAGAAATCCCGTG
GAGGTTCAAGTCCTCTTCTCGGCACCA
Downstream region at tRNA end position 
aatactgttt
Secondary structure (Cloverleaf model)
>WENV170013937	Leu	CAG
                   t      ACCA aatactgttt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G + T          T G
                    T     T C T C C     A
      T A A        G      + | | | |     A
    T       G G C G       G G A G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGGGAGAAATCCCGT
                    C - G
                    A - T
                    T - A
                    G - C
                    G - C
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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