The detailed information of tRNA gene sequence


Sequence ID>WENV170013948
Genome IDAVFP01000245
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 9082
End posion on genome 9172
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agctgattcc
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGCTTAAGGAGCACGCCTGGAAAGTGTGTATAGGTTAATAGCCT
ATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
atcaaaaaca
Secondary structure (Cloverleaf model)
>WENV170013948	Ser	GGA
                   c      GCCA atcaaaaaca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      T T A        G     TATAGGTTAATAGCCTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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