The detailed information of tRNA gene sequence


Sequence ID>WENV170013950
Genome IDAVFP01000256
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 1249
End posion on genome 1331
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
agggcacaac
tRNA gene sequence 
GCCCAGATGGTGAAATTGGTAGACACGCTGTCTTCAGGTGGCAGTGCTTCATGGCGTGCA
GGTTCGAGTCCTGTTCTGGGCACac
Downstream region at tRNA end position 
gatagagtct
Secondary structure (Cloverleaf model)
>WENV170013950	Leu	CAG
                   c      ACac gatagagtct
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     A - T          T G
                    T     T G T C C     A
      T A A        G      + | | | |     G
    T       A G T G       G C A G G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGCTTCATGGCGT
                    C - G
                    T - A
                    G - C
                    T + G
                    C - G
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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