The detailed information of tRNA gene sequence


Sequence ID>WENV170013981
Genome IDAVFP01001017
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 3455
End posion on genome 3531
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ccgtcacggt
tRNA gene sequence 
CGGAGTGTAGCTCAGCCTGGTAGAGCACTGTCTTCGGGAGGCAGGGGTCGTAGGTTCGAA
TCCTGCCACTCCGACCA
Downstream region at tRNA end position 
gtattttcaa
Secondary structure (Cloverleaf model)
>WENV170013981	Pro	CGG
                   t      ACCA gtattttcaa
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     C G T C C     A
      C G A        A      | + | | |     G
    C       C T C G       G T A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    T + G
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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