The detailed information of tRNA gene sequence


Sequence ID>WENV170013984
Genome IDAVFP01001121
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 3356
End posion on genome 3267
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cccctatttt
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGCTGAAAGCGGCACCCTGCTAAGGTGTTATACTGGCAACGGTA
TCGAGGGTTCGAATCCCTCTCTCTCCGCAA
Downstream region at tRNA end position 
gaaaatgccc
Secondary structure (Cloverleaf model)
>WENV170013984	Ser	GCT
                   t      GCAA gaaaatgccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    C       A A G C
      T G A        G     TATACTGGCAACGGTATC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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