The detailed information of tRNA gene sequence


Sequence ID>WENV170013989
Genome IDAVFP01001277
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 2529
End posion on genome 2605
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gcggcggcat
tRNA gene sequence 
GGGTCGGTAGCTCAGGTGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGAGGTTCAAG
TCCTCCTCGACCCACCA
Downstream region at tRNA end position 
ccgccgggtt
Secondary structure (Cloverleaf model)
>WENV170013989	Ile	GAT
                   t      ACCA ccgccgggtt
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     G + T          T G
                    T     C C T C C     A
      G G A        A      | | | | |     A
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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