The detailed information of tRNA gene sequence


Sequence ID>WENV170013991
Genome IDAVFP01001289
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 3462
End posion on genome 3387
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
atttctactt
tRNA gene sequence 
AGGCCAGTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGAGT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
tacattgacg
Secondary structure (Cloverleaf model)
>WENV170013991	Trp	CCA
                   t      GCCA tacattgacg
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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