The detailed information of tRNA gene sequence


Sequence ID>WENV170014022
Genome IDAVFP01002145
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 2329
End posion on genome 2252
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ccttcatttt
tRNA gene sequence 
CGGGATGTAGCTCAGTCCGGTTAGAGTACACGTCTGGGGGGCGTGGGGTCGGAAGTTCGA
ATCTTCTCATCCCGACCA
Downstream region at tRNA end position 
tcattaaagc
Secondary structure (Cloverleaf model)
>WENV170014022	Pro	GGG
                   t      ACCA tcattaaagc
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T C T T C     A
    C T G A        A      + | | | |     G
  C         C T C G       G G A A G     C
  G         | | | +                 T T
  G         G A G T
    T T A          A     GGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    T + G
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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