The detailed information of tRNA gene sequence


Sequence ID>WENV170014040
Genome IDAVFP01003136
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 1298
End posion on genome 1209
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
accgaccggt
tRNA gene sequence 
GGAGACGTGGCCGAGCGGTCGAAGGCGCTCCCCTGCTAAGGGAGTATACCGGAAACGGTA
TCGAGGGTTCGAATCCCTTCGTCTCCGCCA
Downstream region at tRNA end position 
cctgtttctg
Secondary structure (Cloverleaf model)
>WENV170014040	Ser	GCT
                   t      GCCA cctgtttctg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T T C C C     A
      C G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACCGGAAACGGTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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