The detailed information of tRNA gene sequence


Sequence ID>WENV170014044
Genome IDAVFP01003425
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 1424
End posion on genome 1498
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccgttaaaat
tRNA gene sequence 
GGCGAGGTAGCTCAGTTGGTTAGAGCGTCGGATTCATAACCCGGAGGTCACGAGTTCAAA
TCTCGTCCTCGCTACag
Downstream region at tRNA end position 
cagcaaaggt
Secondary structure (Cloverleaf model)
>WENV170014044	Met	CAT
                   t      ACag cagcaaaggt
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T G C T C     A
      T G A        A      | | | | |     A
    T       C T C G       A C G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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