The detailed information of tRNA gene sequence


Sequence ID>WENV170014047
Genome IDAVFP01003588
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 1435
End posion on genome 1511
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccatcgctgg
tRNA gene sequence 
GGCGGAGTAGCTCAGTTGGTTAGAGCAGCGGAATCATAATCCGCGTGTCGGGGGTTCAAG
TCCCTCCTCCGCTACCA
Downstream region at tRNA end position 
ttgttttcct
Secondary structure (Cloverleaf model)
>WENV170014047	Met	CAT
                   g      ACCA ttgttttcct
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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