The detailed information of tRNA gene sequence


Sequence ID>WENV170014052
Genome IDAVFP01003813
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 765
End posion on genome 689
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gccctcggtt
tRNA gene sequence 
CGGAGTATAGCTCAGCCTGGTAGAGCACTGTCTTCGGGAGGCAGGGGTCGCAGGTTCAAA
TCCTGCTACTCCGACCA
Downstream region at tRNA end position 
gttattcccg
Secondary structure (Cloverleaf model)
>WENV170014052	Pro	CGG
                   t      ACCA gttattcccg
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T          T A
                    T     C G T C C     A
      C G A        A      | | | | |     A
    C       C T C G       G C A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    T + G
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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