The detailed information of tRNA gene sequence


Sequence ID>WENV170014054
Genome IDAVFP01003891
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 453
End posion on genome 529
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttataattta
tRNA gene sequence 
GGAGTGGTAGTTCAGTTGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
TCCCGTCCACTCCGCCA
Downstream region at tRNA end position 
actcaataca
Secondary structure (Cloverleaf model)
>WENV170014054	Asp	GTC
                   a      GCCA actcaataca
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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