The detailed information of tRNA gene sequence


Sequence ID>WENV170014060
Genome IDAVFP01004598
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 342
End posion on genome 266
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ctggggaagc
tRNA gene sequence 
GCGGGCGTAGTTCAGTTGGTTAGAACGCTGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
TCCCGTCGCTCGCGCCA
Downstream region at tRNA end position 
ttcccccctt
Secondary structure (Cloverleaf model)
>WENV170014060	Asp	GTC
                   c      GCCA ttcccccctt
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    T + G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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