The detailed information of tRNA gene sequence


Sequence ID>WENV170014065
Genome IDAVFP01004732
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 383
End posion on genome 295
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgcgggcgcc
tRNA gene sequence 
GGAGGCGTGGCAGAGCGGTCGAATGCACCGGTCTTGAAAACCGGCGTGGGTCCTGCCCAC
CGTGGGTTCGAATCCCACCGCCTCCGCCA
Downstream region at tRNA end position 
cctatttcgg
Secondary structure (Cloverleaf model)
>WENV170014065	Ser	TGA
                   c      GCCA cctatttcgg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        A     CGTGGGTCCTGCCCACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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